Feasibility of automated 3-dimensional magnetic resonance imaging pancreas segmentation.

PurposeWith the advent of MR guided radiotherapy, internal organ motion can be imaged simultaneously during treatment. In this study, we evaluate the feasibility of pancreas MRI segmentation using state-of-the-art segmentation methods.Methods and materialT2 weighted HASTE and T1 weighted VIBE images were acquired on 3 patients and 2 healthy volunteers for a total of 12 imaging volumes. A novel dictionary learning (DL) method was used to segment the pancreas and compared to t mean-shift merging (MSM), distance regularized level set (DRLS), graph cuts (GC) and the segmentation results were compared to manual contours using Dice's index (DI), Hausdorff distance and shift of the-center-of-the-organ (SHIFT).ResultsAll VIBE images were successfully segmented by at least one of the auto-segmentation method with DI >0.83 and SHIFT ≤2 mm using the best automated segmentation method. The automated segmentation error of HASTE images was significantly greater. DL is statistically superior to the other methods in Dice's overlapping index. For the Hausdorff distance and SHIFT measurement, DRLS and DL performed slightly superior to the GC method, and substantially superior to MSM. DL required least human supervision and was faster to compute.ConclusionOur study demonstrated potential feasibility of automated segmentation of the pancreas on MRI images with minimal human supervision at the beginning of imaging acquisition. The achieved accuracy is promising for organ localization

Classification of PolSAR Images Using Multilayer Autoencoders and a Self-Paced Learning Approach

In this paper, a novel polarimetric synthetic aperture radar (PolSAR) image classification method based on multilayer autoencoders and self-paced learning (SPL) is proposed. The multilayer autoencoders network is used to learn the features, which convert raw data into more abstract expressions. Then, softmax regression is applied to produce the predicted probability distributions over all the classes of each pixel. When we optimize the multilayer autoencoders network, self-paced learning is used to accelerate the learning convergence and achieve a stronger generalization capability. Under this learning paradigm, the network learns the easier samples first and gradually involves more difficult samples in the training process. The proposed method achieves the overall classification accuracies of 94.73%, 94.82% and 78.12% on the Flevoland dataset from AIRSAR, Flevoland dataset from RADARSAT-2 and Yellow River delta dataset, respectively. Such results are comparable with other state-of-the-art methods

A Mask-Guided Transformer Network with Topic Token for Remote Sensing Image Captioning

Remote sensing image captioning aims to describe the content of images using natural language. In contrast with natural images, the scale, distribution, and number of objects generally vary in remote sensing images, making it hard to capture global semantic information and the relationships between objects at different scales. In this paper, in order to improve the accuracy and diversity of captioning, a mask-guided Transformer network with a topic token is proposed. Multi-head attention is introduced to extract features and capture the relationships between objects. On this basis, a topic token is added into the encoder, which represents the scene topic and serves as a prior in the decoder to help us focus better on global semantic information. Moreover, a new Mask-Cross-Entropy strategy is designed in order to improve the diversity of the generated captions, which randomly replaces some input words with a special word (named [Mask]) in the training stage, with the aim of enhancing the model’s learning ability and forcing exploration of uncommon word relations. Experiments on three data sets show that the proposed method can generate captions with high accuracy and diversity, and the experimental results illustrate that the proposed method can outperform state-of-the-art models. Furthermore, the CIDEr score on the RSICD data set increased from 275.49 to 298.39

Automated Segmentation Method for Low Field 3D Stomach MRI Using Transferred Learning Image Enhancement Network

Accurate segmentation of abdominal organs has always been a difficult problem, especially for organs with cavities. And MRI-guided radiotherapy is particularly attractive for abdominal targets compared with low CT contrast. But in the limit of radiotherapy environment, only low field MRI segmentation can be used for stomach location, tracking, and treatment planning. In clinical applications, the existing 3D segmentation network model is trained by the low field MRI, and the segmentation result cannot be used in radiotherapy plan since the bad segmentation performance. Another way is that historical high field intensity MR images are directly used for data expansion to network learning; there will be a domain shift problem. How to use different domain images to improve the segmentation accuracy of deep neural network? A 3D low field MRI stomach segmentation method based on transfer learning image enhancement is proposed in this paper. In this method, Cycle Generative Adversarial Network (CycleGAN) is used to construct and learn the mapping relationship between high and low field intensity MRI and to overcome domain shift. Then, the image generated by the high field intensity MRI through the CycleGAN network is with transferred information as the extended data. The low field MRI combines these extended datasets to form the training data for training the 3D Res-Unet segmentation network. Furthermore, the convolution layer, batch normalization layer, and Relu layer together were replaced with a residual module to relieve the gradient disappearance of the neural network. The experimental results show that the Dice coefficient is 2.5 percent better than the baseline method. The over segmentation and under segmentation are reduced by 0.7 and 5.5 percent, respectively. And the sensitivity is improved by 6.4 percent

Feasibility of automated 3-dimensional magnetic resonance imaging pancreas segmentation.

PurposeWith the advent of MR guided radiotherapy, internal organ motion can be imaged simultaneously during treatment. In this study, we evaluate the feasibility of pancreas MRI segmentation using state-of-the-art segmentation methods.Methods and materialT2 weighted HASTE and T1 weighted VIBE images were acquired on 3 patients and 2 healthy volunteers for a total of 12 imaging volumes. A novel dictionary learning (DL) method was used to segment the pancreas and compared to t mean-shift merging (MSM), distance regularized level set (DRLS), graph cuts (GC) and the segmentation results were compared to manual contours using Dice's index (DI), Hausdorff distance and shift of the-center-of-the-organ (SHIFT).ResultsAll VIBE images were successfully segmented by at least one of the auto-segmentation method with DI >0.83 and SHIFT ≤2 mm using the best automated segmentation method. The automated segmentation error of HASTE images was significantly greater. DL is statistically superior to the other methods in Dice's overlapping index. For the Hausdorff distance and SHIFT measurement, DRLS and DL performed slightly superior to the GC method, and substantially superior to MSM. DL required least human supervision and was faster to compute.ConclusionOur study demonstrated potential feasibility of automated segmentation of the pancreas on MRI images with minimal human supervision at the beginning of imaging acquisition. The achieved accuracy is promising for organ localization

Semi-Supervised Deep Metric Learning Networks for Classification of Polarimetric SAR Data

Recently, classification methods based on deep learning have attained sound results for the classification of Polarimetric synthetic aperture radar (PolSAR) data. However, they generally require a great deal of labeled data to train their models, which limits their potential real-world applications. This paper proposes a novel semi-supervised deep metric learning network (SSDMLN) for feature learning and classification of PolSAR data. Inspired by distance metric learning, we construct a network, which transforms the linear mapping of metric learning into the non-linear projection in the layer-by-layer learning. With the prior knowledge of the sample categories, the network also learns a distance metric under which all pairs of similarly labeled samples are closer and dissimilar samples have larger relative distances. Moreover, we introduce a new manifold regularization to reduce the distance between neighboring samples since they are more likely to be homogeneous. The categorizing is achieved by using a simple classifier. Several experiments on both synthetic and real-world PolSAR data from different sensors are conducted and they demonstrate the effectiveness of SSDMLN with limited labeled samples, and SSDMLN is superior to state-of-the-art methods

Large-Deformation Image Registration of CT-TEE for Surgical Navigation of Congenital Heart Disease

The surgical treatment of congenital heart disease requires navigational assistance with transesophageal echocardiography (TEE); however, TEE images are often difficult to interpret and provide very limited anatomical information. Registering preoperative CT images to intraoperative TEE images provides surgeons with richer and more useful anatomical information. Yet, CT and TEE images differ substantially in terms of scale and geometry. In the present research, we propose a novel method for the registration of CT and TEE images for navigation during surgical repair of large defects in patients with congenital heart disease. Valve data was used for the coarse registration to determine the basic location. This was followed by the use of an enhanced probability model map to overcome gray-level differences between the two imaging modalities. Finally, the rapid optimization of mutual information was achieved by migrating parameters. This method was tested on a dataset of 240 images from 12 infant, children (≤ 3 years old), and adult patients with congenital heart disease. Compared to the “bronze standard” registration, the proposed method was more accurate with an average Dice coefficient of 0.91 and an average root mean square of target registration error of 1.2655 mm

Multi-Scale Fused SAR Image Registration Based on Deep Forest

SAR image registration is a crucial problem in SAR image processing since the registration results with high precision are conducive to improving the quality of other problems, such as change detection of SAR images. Recently, for most DL-based SAR image registration methods, the problem of SAR image registration has been regarded as a binary classification problem with matching and non-matching categories to construct the training model, where a fixed scale is generally set to capture pair image blocks corresponding to key points to generate the training set, whereas it is known that image blocks with different scales contain different information, which affects the performance of registration. Moreover, the number of key points is not enough to generate a mass of class-balance training samples. Hence, we proposed a new method of SAR image registration that meanwhile utilizes the information of multiple scales to construct the matching models. Specifically, considering that the number of training samples is small, deep forest was employed to train multiple matching models. Moreover, a multi-scale fusion strategy is proposed to integrate the multiple predictions and obtain the best pair matching points between the reference image and the sensed image. Finally, experimental results on four datasets illustrate that the proposed method is better than the compared state-of-the-art methods, and the analyses for different scales also indicate that the fusion of multiple scales is more effective and more robust for SAR image registration than one single fixed scale